![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Niben101Scf12039g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 235aa MW: 27166 Da PI: 5.6629 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.7 | 3.4e-10 | 188 | 222 | 5 | 39 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 kr +r NR +A+rsR RK+++i eLe+ v +L+ Niben101Scf12039g00002.1 188 KRIKRILANRQSAQRSRVRKLQYISELERSVTTLQ 222 899****************************9986 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.6E-10 | 188 | 222 | No hit | No description |
SuperFamily | SSF57959 | 8.44E-9 | 188 | 222 | No hit | No description |
Pfam | PF00170 | 1.4E-8 | 188 | 222 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 2.06E-17 | 189 | 222 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 191 | 206 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 235 aa Download sequence Send to blast |
MAHLPPRVPN MTPNWPDFSH HQKVDITTTT AIHNPSWVDQ FLDFSSMKRG SHRRSISDSI 60 AFLEAPMVEE RRRLSTPGKT TGSEFERFDD EQLMSMFNDX TTGSEFERFD DEQLMSMFND 120 DIANPSSPSD NNSINEEKKM STIISSDDQV MQQQQQLKTE PEEVESSCKS DQHATADNNS 180 SRKIVDPKRI KRILANRQSA QRSRVRKLQY ISELERSVTT LQVCKMIPSF NFLFY |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269|PubMed:17719007, ECO:0000269|PubMed:19449183}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_009777081.1 | 1e-126 | PREDICTED: basic leucine zipper 61-like | ||||
Refseq | XP_016468123.1 | 1e-126 | PREDICTED: basic leucine zipper 61-like | ||||
Swissprot | F4IN23 | 2e-52 | BZP34_ARATH; Basic leucine zipper 34 | ||||
TrEMBL | A0A1S3ZUX9 | 1e-124 | A0A1S3ZUX9_TOBAC; basic leucine zipper 61-like | ||||
TrEMBL | A0A1U7WIJ0 | 1e-124 | A0A1U7WIJ0_NICSY; basic leucine zipper 61-like | ||||
STRING | XP_009777081.1 | 1e-125 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1775 | 24 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G42380.2 | 9e-54 | bZIP family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|