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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Niben101Scf11756g01019.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
AP2 |
| Protein Properties |
Length: 189aa MW: 21462.4 Da PI: 5.0781 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf11756g01019.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 29.8 | 1.5e-09 | 158 | 186 | 1 | 34 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslg 34
s+y+GV++++++grW+++I+d + k+++lg
Niben101Scf11756g01019.1 158 SQYRGVTFYRRTGRWESHIWD------CgKQVYLG 186
78*******************......55****98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MMLDLNLSVI YDEKVPEGSV VDESGTSNSS ARNAEASSSA GDDDTCSTRA GDMFAFNFDI 60
LKVGGAETSR SCSNNDDDQE GYNENQRATR SEFVTRQLFP VDASHTSRKP DWVDLSFDPP 120
NTLSFQEAEI VRAQQQQQQQ RQPQQIKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG 180
KQVYLGMWI
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |
| Annotation -- Protein
? help Back to Top |
| Source |
Hit ID |
E-value |
Description |
| Refseq | XP_009784819.1 | 1e-105 | PREDICTED: ethylene-responsive transcription factor RAP2-7-like isoform X1 |
| Refseq | XP_009784820.1 | 1e-106 | PREDICTED: ethylene-responsive transcription factor RAP2-7-like isoform X2 |
| Refseq | XP_009784821.1 | 1e-106 | PREDICTED: AP2-like ethylene-responsive transcription factor TOE3 isoform X3 |
| Refseq | XP_016501408.1 | 1e-105 | PREDICTED: ethylene-responsive transcription factor RAP2-7-like isoform X1 |
| Refseq | XP_016501409.1 | 1e-106 | PREDICTED: ethylene-responsive transcription factor RAP2-7-like isoform X2 |
| Refseq | XP_016501410.1 | 1e-106 | PREDICTED: AP2-like ethylene-responsive transcription factor TOE3 isoform X3 |
| Swissprot | Q9SK03 | 6e-31 | RAP27_ARATH; Ethylene-responsive transcription factor RAP2-7 |
| TrEMBL | A0A1S4CJK4 | 1e-105 | A0A1S4CJK4_TOBAC; AP2-like ethylene-responsive transcription factor TOE3 isoform X3 |
| TrEMBL | A0A1S4CJN7 | 1e-104 | A0A1S4CJN7_TOBAC; ethylene-responsive transcription factor RAP2-7-like isoform X1 |
| TrEMBL | A0A1S4CKH0 | 1e-104 | A0A1S4CKH0_TOBAC; ethylene-responsive transcription factor RAP2-7-like isoform X2 |
| TrEMBL | A0A1U7X553 | 1e-105 | A0A1U7X553_NICSY; AP2-like ethylene-responsive transcription factor TOE3 isoform X3 |
| TrEMBL | A0A1U7XCZ6 | 1e-104 | A0A1U7XCZ6_NICSY; ethylene-responsive transcription factor RAP2-7-like isoform X1 |
| TrEMBL | A0A1U7XED6 | 1e-104 | A0A1U7XED6_NICSY; ethylene-responsive transcription factor RAP2-7-like isoform X2 |
| STRING | XP_009784819.1 | 1e-105 | (Nicotiana sylvestris) |
