PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf10713g00008.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 286aa MW: 32983.2 Da PI: 5.0125

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf10713g00008.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	32.4	2.8e-10	23	144	27	128
NAM 27 kleleevikevdiykvePwdLpk......kvkaeekew......yfFskrdkkyatgkrknra..tksgyWkatgkdkevlsk.. 95 +l+ + +i+ +d+yk ePw + e++w yf ++r+k+ + r r+ + g Wk++ k+k+v+ k Niben101Scf10713g00008.1 23 ELHDNGFIAMCDVYKQEPWVTYShghstgG---VEDNWdtsiyrYFITPRKKN---KGRFCRTvgKRGGSWKQQDKEKAVTIKsc 101 445556799********99633443331...22233334433555555443...4567774124589********9977 PP NAM 96 ....kgel..vglkktLvfykgrapkge......ktdWvmheyrl 128 + + +g k++ + ++++ k +W+m+ey l Niben101Scf10713g00008.1 102 dqrkR--DliIGRMKSMCYTEKNNTKCInsddynDGKWLMKEYVL 144 65433..156******76555544222232778****87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	14.393	1	168	IPR003441	NAC domain
SuperFamily	SSF101941	3.79E-12	25	166	IPR003441	NAC domain
Pfam	PF02365	1.0E-6	39	144	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence Send to blast
MILEKGIISS DGFGVSEISF KQELHDNGFI AMCDVYKQEP WVTYSHGHST GGVEDNWDTS 60 IYRYFITPRK KNKGRFCRTV GKRGGSWKQQ DKEKAVTIKS CDQRKRDLII GRMKSMCYTE 120 KNNTKCINSD DYNDGKWLMK EYVLSDPILN KFSNSERKDY VICAIKKLPK RKKVDTEVTS 180 GMNNYVVHPL MDQDYFFDQA IVESVELVMV ETEVSVGINS VENQEYNEVI TPIYYIEKPM 240 EESEVQTHEV VGAENGSSLL GLTTFSQTQE AIISDFENAM QEYWTY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009622624.1	1e-157	PREDICTED: uncharacterized protein LOC104113990
TrEMBL	A0A1J6IJZ5	1e-161	A0A1J6IJZ5_NICAT; Uncharacterized protein
STRING	XP_009622624.1	1e-157	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15008	4	8