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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Niben101Scf10465g02005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
C2H2 |
Protein Properties |
Length: 512aa MW: 56043.3 Da PI: 8.9896 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf10465g02005.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 17.2 | 1.4e-05 | 90 | 112 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C+k F r nL+ H r H
Niben101Scf10465g02005.1 90 FVCEICNKGFQRDQNLQLHRRGH 112
89*******************88 PP
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2 | zf-C2H2 | 12.3 | 0.00052 | 166 | 188 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+kC +C+k + +s+ k H +t+
Niben101Scf10465g02005.1 166 WKCDKCSKKYAVQSDWKAHHKTC 188
58*******************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 512 aa
Download sequence Send
to blast |
MSNISGEGGS FSSGNTGEEE VEKHNQAAAH LKTSNNISSI TSNGSSSQSQ QQQNKQQPLA 60 KKKRNLPGTP DPNAEVIALS PTTLMATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ 120 RSTTEVRKRV YICPESTCVH HCPARALGDL TGIKKHYSRK HGEKKWKCDK CSKKYAVQSD 180 WKAHHKTCGT REYKCDCGTI FSRRDSFITH RAFCDALAEE NNKVKQGVTN NNTEPNLQSG 240 QMLGLMSSNA SLGLSDFNNF DPKTPLKSLP QDLLPIPFKS MNNNMAAGAM FSTTSGSLFG 300 SPRSVASSSS GLQSNFNYLQ DTSKNGAGQG QAPMSATALL QKAAQMGATA SSSINSPMMQ 360 KSFVTSGAMA GPYVSPSLYE NFQTQPDNNT NNHQLNLAAV MNDMGMYSGI LMSNDHQNIN 420 TEHDQENNIN TNDSSSVRNQ STVLGHNGNN DMLTVDFLGV GGSSRPPSLH EQQRLEAAIN 480 QQRMQASAIN PFHQQNISHG NNSAMEKPIW DI
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts as a positive regulator of gibberellin (GA) action, homeostasis and signaling. GA converts the GAF1 complex from transcriptional activator to repressor via the degradation of DELLA proteins. {ECO:0000269|PubMed:25035403}. |