PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 657aa MW: 74446.8 Da PI: 6.2094

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf10441g01004.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	160.2	1.4e-49	49	193	3	144
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssa 86 + rk+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+r+AGw+ve+DGttyr++ p+ ++a+ +g + Niben101Scf10441g01004.1 49 KNRKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPVRADMNDVLAALARQAGWTVEPDGTTYRQSPPPTnNSASCMGPYQ 133 78*********************************************************************98999999 PP DUF822 87 saspesslq.sslkssalaspvesysaspksssfpspssldsislasa.asllpvlsvls 144 +s+es+++ sl+++++++ v+ + ++p+ ++++sp+s+dsi ++++ +++ +++s+ + Niben101Scf10441g01004.1 134 VMSVESPVSgRSLRNCSTRASVDCQPSVPRINESLSPASFDSIVVTESdTKVDKFTSTST 193 ******************************************9988544444444432 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.2E-50	49	198	IPR008540	BES1/BZR1 plant transcription factor, N-terminal
SuperFamily	SSF51445	1.02E-154	219	651	IPR017853	Glycoside hydrolase superfamily
Gene3D	G3DSA:3.20.20.80	1.6E-168	221	650	IPR013781	Glycoside hydrolase, catalytic domain
Pfam	PF01373	1.9E-81	242	613	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.2E-53	258	272	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.2E-53	279	297	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.2E-53	301	322	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.2E-53	394	416	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.2E-53	467	486	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.2E-53	501	517	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.2E-53	518	529	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.2E-53	536	559	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.2E-53	572	594	IPR001554	Glycoside hydrolase, family 14

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000272	Biological Process	polysaccharide catabolic process
GO:0048831	Biological Process	regulation of shoot system development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0016161	Molecular Function	beta-amylase activity

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence Send to blast
MNNHIPHHSI PNTQDPDPQF PNPNPPPQPQ PRRPRGFAAT NPAAGATNKN RKEREKEKER 60 TKLRERHRRA ITSRMLAGLR QYGNFPLPVR ADMNDVLAAL ARQAGWTVEP DGTTYRQSPP 120 PTNNSASCMG PYQVMSVESP VSGRSLRNCS TRASVDCQPS VPRINESLSP ASFDSIVVTE 180 SDTKVDKFTS TSTMNSTECL EASQIMQELH SGEHVIGLSG TQYVPVFVML SSGVINNFCQ 240 LMDPDSLKQE LQQLKSLRID GVVVNCWWGI IESWVPQKYE WSGYRELLNI IRDFKLKLQV 300 VMAFHENGGS DTSGMFISLP QWVLEIGKDN QDIFFTDRQG RRNTECLSWG IDKERVLRGR 360 TAIEVYFDMM RSFRTEFDDL FADGLISAVE IGLGASGELK YPSFSERIGW RYPGIGEFQC 420 YDKYSMLNLR KAATSRGHSF WAKGPDNAGY YNSKPHETEF FCERGDYDSY YGRFFLHWYR 480 QVLIDHADDV LSLATLAFEG VQLVVKIPAI YWWYRTSSHA AEVTAGYYNP ANQDGYSPVF 540 EVLKRHSVTV KFICSGFQVP EIDDALADPD GLSWQILNSA WDKTLPVAGQ NAFPCYDREG 600 LMRLVETSKP RNDPDHHCFS FFAFQQPSPL VQSAICISEL DYFIKSMHGE IINNVES

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence Send to blast

MNNHIPHHSI PNTQDPDPQF PNPNPPPQPQ PRRPRGFAAT NPAAGATNKN RKEREKEKER  60
TKLRERHRRA ITSRMLAGLR QYGNFPLPVR ADMNDVLAAL ARQAGWTVEP DGTTYRQSPP  120
PTNNSASCMG PYQVMSVESP VSGRSLRNCS TRASVDCQPS VPRINESLSP ASFDSIVVTE  180
SDTKVDKFTS TSTMNSTECL EASQIMQELH SGEHVIGLSG TQYVPVFVML SSGVINNFCQ  240
LMDPDSLKQE LQQLKSLRID GVVVNCWWGI IESWVPQKYE WSGYRELLNI IRDFKLKLQV  300
VMAFHENGGS DTSGMFISLP QWVLEIGKDN QDIFFTDRQG RRNTECLSWG IDKERVLRGR  360
TAIEVYFDMM RSFRTEFDDL FADGLISAVE IGLGASGELK YPSFSERIGW RYPGIGEFQC  420
YDKYSMLNLR KAATSRGHSF WAKGPDNAGY YNSKPHETEF FCERGDYDSY YGRFFLHWYR  480
QVLIDHADDV LSLATLAFEG VQLVVKIPAI YWWYRTSSHA AEVTAGYYNP ANQDGYSPVF  540
EVLKRHSVTV KFICSGFQVP EIDDALADPD GLSWQILNSA WDKTLPVAGQ NAFPCYDREG  600
LMRLVETSKP RNDPDHHCFS FFAFQQPSPL VQSAICISEL DYFIKSMHGE IINNVES

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1v3i_A	1e-122	223	611	11	401	Beta-amylase
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00543	DAP	Transfer from AT5G45300	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016463704.1	0.0	PREDICTED: beta-amylase 8-like
Swissprot	Q9FH80	0.0	BAM8_ARATH; Beta-amylase 8
TrEMBL	A0A1S3ZH49	0.0	A0A1S3ZH49_TOBAC; Beta-amylase
STRING	XP_009769112.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1607	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	0.0	beta-amylase 2

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]