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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Niben101Scf09424g04003.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
bZIP |
| Protein Properties |
Length: 344aa MW: 38320.4 Da PI: 6.5185 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf09424g04003.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 31.8 | 3e-10 | 144 | 200 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
kr++r NR +A+rs +RK ++ eLe+kv++L++e ++L +l + + ++
Niben101Scf09424g04003.1 144 KRAKRILANRQSASRSKERKARYMTELERKVQTLQTEATTLSAQLTLFQRDTTQFTN 200
9*****************************************999877766666555 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MQDPSNPNSK NQTPSFSATF RPSHHRRAHS EVNFRLPEDL DLVSDPFDAS TGSFEEIGSE 60
EDFFSTYMDI EKLGTGSNPT DGFNNAAGSS SGLLVADGEK TFSRPRHRHS NSVDSSSLLL 120
SESIEAKKAM APDKLAELWT IDPKRAKRIL ANRQSASRSK ERKARYMTEL ERKVQTLQTE 180
ATTLSAQLTL FQRDTTQFTN ENTELKIRLQ AMAQQAQLRD ALNEALKQEV ERLKMATGEM 240
SSSSDAYNLG MQHIPYNQSA FFSHQTQSGP NESQNIQMQQ FHSLQDSLLT PHRRLFAGHG 300
QALPDTMQQD PLGRFQGLDI GGRGMHHVKT ETPSISASES SSTL
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Pawar V, et al.
A novel family of plant nuclear envelope-associated proteins.
J. Exp. Bot., 2016. 67(19): p. 5699-5710
[PMID:27630107] - Gibalová A, et al.
Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
Plant Reprod, 2017. 30(1): p. 1-17
[PMID:27896439] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
Efficient gene tagging in Arabidopsis thaliana using a gene trap approach.
Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7
[PMID:9356517]
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