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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Niben101Scf09387g05005.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
NAC |
| Protein Properties |
Length: 336aa MW: 39032.7 Da PI: 6.9367 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf09387g05005.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 180.2 | 5.3e-56 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgy 82
+ppGfrFhPtdeelv++yL+kk+++k+++l +vike+d+yk+ePwdL++ k+ +ee+ +wyfFs++dkky+tg+r+nratk+g+
Niben101Scf09387g05005.1 7 VPPGFRFHPTDEELVDYYLRKKIASKRIDL-DVIKEIDLYKIEPWDLQElcKIGTEEQsDWYFFSHKDKKYPTGTRTNRATKAGF 90
69****************************.9***************954555554445************************** PP
NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
Wkatg+dk++++ k++l+g++ktLvfykgrap+g+k+dW+mheyrle
Niben101Scf09387g05005.1 91 WKATGRDKAIYR-KHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
************.8899****************************85 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0048759 | Biological Process | xylem vessel member cell differentiation |
| GO:1901348 | Biological Process | positive regulation of secondary cell wall biogenesis |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MNSFTHVPPG FRFHPTDEEL VDYYLRKKIA SKRIDLDVIK EIDLYKIEPW DLQELCKIGT 60
EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YRKHSLIGMR KTLVFYKGRA 120
PNGQKSDWIM HEYRLETNEN GTTQASILNQ KYEEGWAVCR VFKKKLATTM RREGEHESLC 180
WYNEDQVSNF MPDFESPRRF PNPYSATAYH NPMLACTNNM QQPPNDAFLQ LPQLESPKVP 240
QSYGSNMNQM VQSNSIYNNN NYDHQVVDQL TDWRVLDKFV ASQLSQEDGC SKTETSTVAC 300
SSSPASEQMN LQLQNDFKSQ EMASELASSS QVDLWK
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:16103214, PubMed:25148240). {ECO:0000250|UniProtKB:Q9LVA1, ECO:0000269|PubMed:16103214, ECO:0000269|PubMed:25148240}. |
