PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf08334g01011.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 315aa    MW: 35191.9 Da    PI: 9.2262
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf08334g01011.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.52.9e-082322701755
                               HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                               A+rsR RK+++i eLe+ v++L+ae ++   ele l+++
  Niben101Scf08334g01011.1 232 AQRSRVRKLQYISELEQNVQALQAEGSEVSAELEFLNQQ 270
                               89*******************************999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.004221280IPR004827Basic-leucine zipper domain
CDDcd147033.25E-16223270No hitNo description
SuperFamilySSF579595.16E-6232274No hitNo description
Gene3DG3DSA:1.20.5.1705.1E-6232271No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MANSKGASSM RNMVYNGKSS LLPPKSPFPS ISPSYVDYVP SSAVTQKGIS KSRDGSHHQR  60
TSSESCLIEE QPSWLDDLLN EPETPVRRGG HRRSSSDSFT YHDAANIANL DYITQDDNKF  120
RNLTPVPSWG SQDFDYNKDA RHATFHVDQN FSNRQKNRAR DGSPNAIQHH RGRPPFRENV  180
KTHSLVAACP PQEGERPTSA GSDAGSGEKK NSSHSKSSAS ESDTKRAKQQ FAQRSRVRKL  240
QYISELEQNV QALQAEGSEV SAELEFLNQQ SLILSIENKA LKQRLENLAQ EQLIKYCKFL  300
LYLSYFIVVS AISSA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016451222.10.0PREDICTED: uncharacterized protein At4g06598-like
RefseqXP_016451224.10.0PREDICTED: uncharacterized protein At4g06598-like
TrEMBLA0A1S3YH000.0A0A1S3YH00_TOBAC; uncharacterized protein At4g06598-like
STRINGXP_009596001.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27651733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-66bZIP family protein