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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Niben101Scf08278g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
ERF |
Protein Properties |
Length: 366aa MW: 41728.6 Da PI: 4.5625 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf08278g00007.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.1 | 1.2e-19 | 133 | 183 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ kl+g
Niben101Scf08278g00007.1 133 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 183
59********.**********82....35*************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MDHYMLCPIK YTEHRNVIRK VTKPSRVKSK KFPEPQKSNQ YNRFVPPKTV WISVTDPDAT 60 DSSSDEEDEL FGRRRVKKYI NEISIETAVK CEVSMPTNGK TAVKKRAADV LQPKQKPMKV 120 KEVQPLQSAG TVKKFRGVRQ RPWGKWAAEI RDPARRVRLW LGTYDTAEEA AMVYDNAAIK 180 LRGPDALTNF ITPPRPEIDV PSNSGYESGN ESRNIPSPTS VLRFIMSQSS EETEQQSRSE 240 PVQEECPSVQ GPMECEQPVQ DFEPVQNVEL FGLPVKQEME ECQGETSMIP DYSNAYLPID 300 VPFLEDFFNF EAAEQTLFED TTTGFPNDFG TSYNATSSSD FMNDFLFNDD FYNFYDSFQD 360 LGTSSD
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