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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Niben101Scf07850g08004.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
NAC |
| Protein Properties |
Length: 206aa MW: 23126 Da PI: 8.6946 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf07850g08004.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 76.2 | 7.8e-24 | 8 | 83 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++++w+fF++ + ++a+g r++r t++gyWkatg+ v+s++ + +g k+t+vfykgrap+g+kt W m+ey++
Niben101Scf07850g08004.1 8 DDSEQWFFFIPIQDREARGGRPTRLTTEGYWKATGTPGYVYSSNCRIIGGKRTMVFYKGRAPNGKKTLWKMNEYKA 83
46679*********************************************************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MAGEGIRDDS EQWFFFIPIQ DREARGGRPT RLTTEGYWKA TGTPGYVYSS NCRIIGGKRT 60
MVFYKGRAPN GKKTLWKMNE YKASDGEASA TNCVTNLKLR HEFSLCRIYK KSKCVRGFDR 120
RPAGFGIIEG TVLPQPLNAA GNYEATPSKK NINPSNDKNL LAPNVYLMES SSSGEEHART 180
PQPVETSNGD LDFSDVPLWD WDCHFI
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-17 | 11 | 116 | 71 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-17 | 11 | 116 | 71 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-17 | 11 | 116 | 71 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-17 | 11 | 116 | 71 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 4e-17 | 11 | 112 | 74 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 4e-17 | 11 | 112 | 74 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 4e-17 | 11 | 112 | 74 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 4e-17 | 11 | 112 | 74 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 4e-17 | 11 | 112 | 74 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 4e-17 | 11 | 112 | 74 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 4e-17 | 11 | 112 | 74 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 4e-17 | 11 | 112 | 74 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 3e-17 | 11 | 116 | 71 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 3e-17 | 11 | 116 | 71 | 170 | NAC domain-containing protein 19 |
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