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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Niben101Scf07764g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
NAC |
Protein Properties |
Length: 418aa MW: 47585.6 Da PI: 8.4023 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf07764g00002.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 161 | 4.4e-50 | 40 | 166 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWk 84
+ pGfrF Ptdeel+++yLkkkveg++ + evi+ev+i k+ePwdLp k++ ++++ew+fFs+r +ky++g++++rat+sgyWk
Niben101Scf07764g00002.1 40 MFPGFRFCPTDEELISYYLKKKVEGSDRCV-EVISEVEIWKHEPWDLPdKSIVQSDNEWFFFSPRGRKYPNGSQSKRATESGYWK 123
579************************777.99***************778888999**************************** PP
NAM 85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
atgk+++v+s +++ +g+k+tLvf++grapkg++t+W+mhey +
Niben101Scf07764g00002.1 124 ATGKKRNVKS-GSNMIGTKRTLVFHTGRAPKGQRTQWIMHEYCM 166
**********.99*****************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 418 aa
Download sequence Send
to blast |
MEDVSGSTDE KKGREIVERS ENNGNDDKNV EISVATASTM FPGFRFCPTD EELISYYLKK 60 KVEGSDRCVE VISEVEIWKH EPWDLPDKSI VQSDNEWFFF SPRGRKYPNG SQSKRATESG 120 YWKATGKKRN VKSGSNMIGT KRTLVFHTGR APKGQRTQWI MHEYCMTGNS YYQDSVVVCR 180 LRKNNEFHLN DTHENRRNHL GNDCATALSG AGKLNSLELI NGGDCCSKEG SSSFSSHSVE 240 KIESGSDSDK LTKELPQQQS SSQWKDCDEE DCFADIMKDD IVKLDDSSYK ARYNVLPIAN 300 RKLESSTNSS TQEFQDVMSH RLPFQGTANR RLRLQTEIVP RRVGRYEANK KNGHAVDASR 360 HLRNNIIPVR RIKQWSIPLL LVSLALLVIF LCMFGIPHLK WLRHLLVITP AEVDTRPA
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 8e-44 | 31 | 185 | 8 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 8e-44 | 31 | 185 | 8 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 8e-44 | 31 | 185 | 8 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 8e-44 | 31 | 185 | 8 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 9e-44 | 31 | 185 | 11 | 169 | NAC domain-containing protein 19 |
3swm_B | 9e-44 | 31 | 185 | 11 | 169 | NAC domain-containing protein 19 |
3swm_C | 9e-44 | 31 | 185 | 11 | 169 | NAC domain-containing protein 19 |
3swm_D | 9e-44 | 31 | 185 | 11 | 169 | NAC domain-containing protein 19 |
3swp_A | 9e-44 | 31 | 185 | 11 | 169 | NAC domain-containing protein 19 |
3swp_B | 9e-44 | 31 | 185 | 11 | 169 | NAC domain-containing protein 19 |
3swp_C | 9e-44 | 31 | 185 | 11 | 169 | NAC domain-containing protein 19 |
3swp_D | 9e-44 | 31 | 185 | 11 | 169 | NAC domain-containing protein 19 |
4dul_A | 8e-44 | 31 | 185 | 8 | 166 | NAC domain-containing protein 19 |
4dul_B | 8e-44 | 31 | 185 | 8 | 166 | NAC domain-containing protein 19 |
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