![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Niben101Scf07691g00014.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GRAS |
Protein Properties |
Length: 354aa MW: 40276.4 Da PI: 4.7011 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf07691g00014.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Nbe&pid=Niben101Scf07691g00014.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 186 | 2.7e-57 | 86 | 352 | 84 | 374 |
GRAS 84 fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakf 168
++ P+ ++++++ qaI + v ++e+vHiiD++i++G+QW L+qaL + + ++++e t erL +f
Niben101Scf07691g00014.1 86 AYHSVPLAQVTQFAGVQAIIDHVGESEKVHIIDLEIGNGMQWTILMQALLI----------ALCTK----LRHKIEDTCERLMSF 156
47889*******************************************964..........44444....5569*********** PP
GRAS 169 AeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesF 253
A++l+++f+fn+++++++ +l+ e+++++ +E++a+ ++ l+r+l+++ +l+s +++++k+++P+ ++v+e ea+hns+ F
Niben101Scf07691g00014.1 157 AKSLNLSFSFNIVMVEDIMELKQEDFELDDEEVVAIFAQYFLMRMLARPDKLDS----LMRVIKDINPRAMIVIEVEANHNSPVF 237
**********************************************77777777....*************************** PP
GRAS 254 lerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqak 338
+ rf+eal +y d+++ +++r+ E e l++ i+ +va+e +er+ rh + Wr+ +++ G+++v+ls++ +a+
Niben101Scf07691g00014.1 238 VGRFVEALFFYE---DCMKHD----EKNRTATESEHLNQGIRIIVAAESEERTIRHVKIDVWRMFFGRYGMEEVELSKSSLYEAN 315
***********9...555444....688999****************************************************** PP
GRAS 339 lllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
l+l+++ + ++e ++++l+ gWk+ pL s+SaW+
Niben101Scf07691g00014.1 316 LVLKNFVcGSSCTLEMNQNCLLVGWKGTPLNSLSAWT 352
*******9999*************************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MFSHPFASSF LSLSEDDTRN MTLVEYLLAS AEKVGQKQFD CAGNLLNECD KINWETGIGK 60 SKGIGMKQLA YIEDSLMSLN SSMIEAYHSV PLAQVTQFAG VQAIIDHVGE SEKVHIIDLE 120 IGNGMQWTIL MQALLIALCT KLRHKIEDTC ERLMSFAKSL NLSFSFNIVM VEDIMELKQE 180 DFELDDEEVV AIFAQYFLMR MLARPDKLDS LMRVIKDINP RAMIVIEVEA NHNSPVFVGR 240 FVEALFFYED CMKHDEKNRT ATESEHLNQG IRIIVAAESE ERTIRHVKID VWRMFFGRYG 300 MEEVELSKSS LYEANLVLKN FVCGSSCTLE MNQNCLLVGW KGTPLNSLSA WTFS
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