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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Niben101Scf07034g01002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
SRS |
| Protein Properties |
Length: 348aa MW: 37461.3 Da PI: 6.6621 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf07034g01002.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 224.1 | 2.8e-69 | 115 | 273 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrel........k 79
g++sCqdCGnqakkdC+h+RCRtCCksrgf+C+thvkstWvpaakrrerqqql++++++++++++++++ r+ + +
Niben101Scf07034g01002.1 115 GGGISCQDCGNQAKKDCEHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLTTLQQQQEEQKQQQQQTRQLQIdnnpkrqrE 199
5789****************************************************99998887744444443333333333223 PP
DUF702 80 skkqsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
++s+l +t++ + s++ le+ ++P++vss+avf+cvr+ssvdd+e+++aYqtav+igGhvfkGiLydqG+e+
Niben101Scf07034g01002.1 200 DPSSSSLVCTRILPS-STSGLEVGNFPSKVSSTAVFHCVRMSSVDDAEDQFAYQTAVNIGGHVFKGILYDQGPEN 273
345566666776555.455899999************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MAGFFSLGGG AASSSQAQDQ QHQQNTNNPP TEISPESWFL YRNDQELPTY RGFELWQTSN 60
SQPQIRHPVN PLQDLYPTAA VGLGVGPSLS DFTMTAARPD HDPSSGGLVM MRSGGGGISC 120
QDCGNQAKKD CEHMRCRTCC KSRGFQCQTH VKSTWVPAAK RRERQQQLTT LQQQQEEQKQ 180
QQQQTRQLQI DNNPKRQRED PSSSSLVCTR ILPSSTSGLE VGNFPSKVSS TAVFHCVRMS 240
SVDDAEDQFA YQTAVNIGGH VFKGILYDQG PENHYMAAGE SSSAGGSASD HHNLIGAAGT 300
ATSAATTSAS GGGVAAAPEA SPYLDPSLYP APINTFMAGT QFFPPPRS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G51060.1 | 1e-71 | Lateral root primordium (LRP) protein-related |
