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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf06749g01004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 131aa MW: 15147.4 Da PI: 10.4127 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69.7 | 7.7e-22 | 14 | 122 | 3 | 110 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyW 83 +GfrF+Ptdeel+ +yL k v+ k+ ++ ++i+ d+y +Pwd+ +++ ++++++ yfF+k ++++a g+r +r + g W Niben101Scf06749g01004.1 14 VGFRFRPTDEELI-RYLLKFVSCKNYSC-DHIRVEDLYGNkKPWDIFeSNFLGDDTKLnYFFTKLKRTKAGGSRFSRrLIGGGCW 96 7************.9**********999.88**99*996549****6345555666556***************9997999**** PP NAM 84 katgkdkevlskkgelvglkktLvfyk 110 k k+k+v++ +++lvg kk++ + + Niben101Scf06749g01004.1 97 KGLDKHKSVFK-GSKLVGSKKSFRYLE 122 **********9.9**********9985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.22E-21 | 10 | 123 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 20.209 | 12 | 131 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.4E-12 | 14 | 121 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MTSSSHNYGP NEVVGFRFRP TDEELIRYLL KFVSCKNYSC DHIRVEDLYG NKKPWDIFES 60 NFLGDDTKLN YFFTKLKRTK AGGSRFSRRL IGGGCWKGLD KHKSVFKGSK LVGSKKSFRY 120 LEKGIKNLFG I |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019238850.1 | 9e-80 | PREDICTED: NAC domain-containing protein 68-like | ||||
Refseq | XP_019244620.1 | 9e-80 | PREDICTED: NAC domain-containing protein 68-like | ||||
TrEMBL | A0A1J6KHW8 | 2e-78 | A0A1J6KHW8_NICAT; Nac domain-containing protein 78 | ||||
STRING | XP_009798779.1 | 1e-75 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA10426 | 6 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 1e-17 | NAC domain containing protein 2 |