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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf06081g01013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 166aa MW: 18886.5 Da PI: 6.3531 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.7 | 2.9e-09 | 120 | 157 | 6 | 43 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 r+rr++kNRe+A rsR+RK+ + + +++L +e + Niben101Scf06081g01013.1 120 RQRRMIKNRESAARSRARKQLSYNLFIRLCDVLGGEKE 157 9*******************888888888887777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 1.2E-6 | 120 | 157 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.04E-5 | 120 | 156 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.2E-7 | 120 | 140 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 122 | 137 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence Send to blast |
MNLDDLLNNF WDNEGNQVTP NSNQDIPTKE GQHSRYDFLN HSKCAENGKE NADSSPTHHQ 60 IFEQVNGGFI YGHQNSDQIN TTNKENIENS NSASDVSEPI YNSRRRSSSV SLEATVMENR 120 QRRMIKNRES AARSRARKQL SYNLFIRLCD VLGGEKETAN KSSMDC |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009774980.1 | 5e-83 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A1U7WL52 | 1e-81 | A0A1U7WL52_NICSY; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
STRING | XP_009774980.1 | 2e-82 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16902 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.2 | 3e-11 | abscisic acid responsive elements-binding factor 2 |