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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Niben101Scf05821g02003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
NAC |
Protein Properties |
Length: 246aa MW: 28322.2 Da PI: 8.571 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf05821g02003.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 142.3 | 2.7e-44 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
lppGfrF+Pt+ee+v +yL +k+ + +l++ ++i+e++i+k++PwdLp + e++ yfFs+++ ky++g+r+nrat gyW
Niben101Scf05821g02003.1 14 LPPGFRFQPTEEEIVFQYLIRKTFSCPLPA-SIIPEINICKHDPWDLPGDI---EQDRYFFSNKEAKYRNGNRSNRATLGGYWTP 94
79****************************.89***************554...5689*************************** PP
NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
tg dk+++++ ++ g+kktLv+ykg+++++++tdW+mheyrl
Niben101Scf05821g02003.1 95 TGLDKQITCSkRKPILGMKKTLVLYKGKSSHATRTDWIMHEYRL 138
********98345559**************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
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to blast |
MDNFNFVKDG AIKLPPGFRF QPTEEEIVFQ YLIRKTFSCP LPASIIPEIN ICKHDPWDLP 60 GDIEQDRYFF SNKEAKYRNG NRSNRATLGG YWTPTGLDKQ ITCSKRKPIL GMKKTLVLYK 120 GKSSHATRTD WIMHEYRLVL PKNQPFNFHH FKKSSQSSMV QIGNWVLCHV FMKKRNGKCD 180 QDIPEADHQH VQIPKVQTLY YDFMREDLSD RAISSCSSSL SIDDSTEVSS SPSGLVEHEE 240 ASNRAL
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-40 | 12 | 178 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-40 | 12 | 178 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-40 | 12 | 178 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-40 | 12 | 178 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-40 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
3swm_B | 5e-40 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
3swm_C | 5e-40 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
3swm_D | 5e-40 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
3swp_A | 5e-40 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
3swp_B | 5e-40 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
3swp_C | 5e-40 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
3swp_D | 5e-40 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
4dul_A | 5e-40 | 12 | 178 | 15 | 170 | NAC domain-containing protein 19 |
4dul_B | 5e-40 | 12 | 178 | 15 | 170 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |