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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Niben101Scf05060g01009.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
NAC |
Protein Properties |
Length: 377aa MW: 42840.9 Da PI: 6.1703 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf05060g01009.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 168.8 | 1.7e-52 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
+ pGfrFhPtdeelv +yLk+k++++++++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wka
Niben101Scf05060g01009.1 14 MLPGFRFHPTDEELVGFYLKRKIQQRSFPM-ELIKQVDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKA 97
579***************************.99***************9888999****************************** PP
NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
tg+d++++s+ +++ +glkk+Lvfy+gra +g ktdW+mhe+rl
Niben101Scf05060g01009.1 98 TGTDRPIYSSdSTKCIGLKKSLVFYRGRAARGIKTDWMMHEFRL 141
*********955666***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 377 aa
Download sequence Send
to blast |
MDNKSDVEKI DEVMLPGFRF HPTDEELVGF YLKRKIQQRS FPMELIKQVD IYKFDPWDLP 60 KLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDST KCIGLKKSLV 120 FYRGRAARGI KTDWMMHEFR LPTTNIESAQ PKKFLDRNFP PNDSWAICRI FKKTNSMANR 180 ALSYPWINPV SEVASPEVFN QSTAVHFGSE NISSLTETGS LLHLSSNNDL ASNVPSYKTL 240 NTMVSRPSFL SSPSTEVPCN FMFSSPEVSM FFNTSPALTS ETIDFEGSNQ QINSFSISSS 300 QEMQRSIGME DDETGLKSNQ DSANNNTTQW ENIRSIGFPF SLTTSLADEW KPSLSWDSPS 360 CPSEISTTYD STNKCYT
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Functional Description ? help
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Source |
Description |
UniProt | Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane. {ECO:0000269|PubMed:19081078}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by SMB in oriented-divised root cap stem cells. {ECO:0000269|PubMed:19081078}. |