PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf04740g01004.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 217aa    MW: 24436 Da    PI: 4.8431
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf04740g01004.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like27.95.1e-09191215125
                   G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                               k+r+rWt+ L +rFve+v++LGG++
  Niben101Scf04740g01004.1 191 KTRIRWTQHLNDRFVECVNRLGGAD 215
                               68*********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.9E-7189216IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MSIQRAEQTH AYNSEFAADY NIEFQQNIDQ QKSTSCLEFC FQPGTSAENC YQQISWPNTD  60
SSSTTIISRI GSPPSAFFAT ERLIQYEYQD NSCQLSKYND PQLPSYPQCD FPKISMPSFI  120
RSQLSSSQPL GPEGAYGNPF CNLSEKERLV ILKSKLLGEF DSMPVFHENQ DYGITNNVNN  180
SGCSGGSLSN KTRIRWTQHL NDRFVECVNR LGGADSK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009765656.11e-129PREDICTED: uncharacterized protein LOC104217181 isoform X2
TrEMBLA0A1U7VL191e-128A0A1U7VL19_NICSY; uncharacterized protein LOC104217181 isoform X2
STRINGXP_009765655.11e-127(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24912458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-09G2-like family protein