PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf04684g01013.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 314aa MW: 35788.5 Da PI: 8.9639

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf04684g01013.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.7	5e-08	172	212	15	55
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +A rsR RK++ i+eLe+ +++L+ae ++L ele l ++ Niben101Scf04684g01013.1 172 QSAHRSRVRKLQHIAELERTIQALQAEGSELSAELEFLDQQ 212 69*********************************988765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	5.41E-13	163	214	No hit	No description
SMART	SM00338	2.8E-5	163	222	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.38E-7	172	216	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.3E-8	172	216	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MESSNESSSL KNFSFSNKQL IMDSTEGSGS GSSHHHRCNS ESFLIEEQPS WLDDLLNEPA 60 ETVIVHKGHR RSASDTFAYV GAAAERLNTR EINNNVNVGG SSINYVSYKD HLTSSVTYDT 120 KPTSAKAALE LNEKHNREVI NTQNKEGSSE RSNNTQAKHA LSKADAKRAK QQSAHRSRVR 180 KLQHIAELER TIQALQAEGS ELSAELEFLD QQNIILSMEN RALRKRLDSL SQEQLIKHLE 240 QEMLERELTR LQTLYQMQRQ QMQQQQQHQQ PQQQNHSKHR RNKSRDLEVQ FANLSIKNNE 300 ASSSRVQTTG SVRM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016499288.1	0.0	PREDICTED: uncharacterized protein At4g06598-like
TrEMBL	A0A1S4CDR8	0.0	A0A1S4CDR8_TOBAC; uncharacterized protein At4g06598-like
STRING	XP_009765647.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11445	20	23

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	2e-39	bZIP family protein