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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf04473g06001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 225aa MW: 25427.9 Da PI: 8.8848 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.6 | 5.5e-13 | 25 | 76 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 k+ +r+++NRe+ArrsR +K+ ++eL+++v +L+a N++ ++ee ++ Niben101Scf04473g06001.1 25 KKRKRMISNRESARRSRMKKQNLVQELTKEVSKLQAANRTIVAKIEETTERL 76 899************************************9999999887765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-14 | 21 | 85 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.5E-11 | 23 | 80 | No hit | No description |
PROSITE profile | PS50217 | 10.335 | 23 | 76 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.97E-10 | 25 | 78 | No hit | No description |
Pfam | PF00170 | 1.3E-10 | 25 | 75 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 6.36E-14 | 26 | 76 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 28 | 43 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MSALRQSGSS SASERDQRYA CMDEKKRKRM ISNRESARRS RMKKQNLVQE LTKEVSKLQA 60 ANRTIVAKIE ETTERLTYCT AQHNVLRAQE TELTDRLKSL NDLINHSGLV TDVTNVADCL 120 LKPWQITCSM QQISASSGFK LQAANRTIVA KIEETTERLT YCTAQHNVLR AQETELTDRL 180 KSLNDLINHS GLVTDVTNVA DCLLKPWQIT CSMQQISASS GLFQY |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019255239.1 | 4e-91 | PREDICTED: bZIP transcription factor 53-like | ||||
TrEMBL | A0A1J6HZ84 | 1e-89 | A0A1J6HZ84_NICAT; Bzip transcription factor 53 | ||||
STRING | XP_009779504.1 | 4e-90 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11126 | 15 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 9e-34 | basic region/leucine zipper motif 53 |