PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf04430g03018.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 192aa MW: 22357.8 Da PI: 5.6448 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.1 | 8e-13 | 85 | 144 | 5 | 64 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 +++rr+ +NRe+ArrsR RK+ ++eL v L +eN+ L ++l++ ++ +k+ +e++ Niben101Scf04430g03018.1 85 RKQRRMVSNRESARRSRMRKQRHLDELWSQVLRLRTENQNLMNKLNQVTESHDKVIQENM 144 79***********************************************99999888875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.8E-15 | 81 | 145 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.346 | 83 | 146 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.67E-12 | 85 | 135 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.3E-11 | 85 | 135 | No hit | No description |
Pfam | PF00170 | 8.2E-11 | 85 | 143 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.04E-18 | 86 | 137 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 88 | 103 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MISSEAATIP YLAQENNPSS LPIDFCFIHK NLPAFQYNTF LTNNNIQNYQ ASFPVQDFSQ 60 QPSCISSNST SDESEEQQIR IIDERKQRRM VSNRESARRS RMRKQRHLDE LWSQVLRLRT 120 ENQNLMNKLN QVTESHDKVI QENMQLKEEA SDLRRMITDI QIDCPFHAFS DLDEVTCNTA 180 HLKAESSNQS TT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 104 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019224146.1 | 1e-131 | PREDICTED: basic leucine zipper 43-like | ||||
Swissprot | Q9FMC2 | 1e-38 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A1J6IND3 | 1e-129 | A0A1J6IND3_NICAT; Basic leucine zipper 43 | ||||
STRING | XP_009794536.1 | 1e-129 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA947 | 24 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 4e-48 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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