 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Niben101Scf04323g01009.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
NAC |
| Protein Properties |
Length: 295aa MW: 33836.9 Da PI: 7.9422 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf04323g01009.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 161.5 | 3.1e-50 | 30 | 155 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWka 85
pGfrFhPtdeelv +yL +kve++++ l + ike+diyk++PwdLp+ +++e+ewy+++kr +ky+++ r+nr ++ sg+Wka
Niben101Scf04323g01009.1 30 LPGFRFHPTDEELVGFYLPRKVEKRPIAL-QLIKEMDIYKYDPWDLPQGSNKGENEWYYYCKRGRKYKNSVRPNRvTAGSGFWKA 113
59*************************99.89***************98889999********************5556****** PP
NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
tg+dk+++s kge++glkk+Lv+y+g+a kg+kt+W+mhe+rl
Niben101Scf04323g01009.1 114 TGTDKPIYS-KGEVIGLKKSLVYYRGSAGKGTKTEWMMHEFRL 155
*********.999****************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MGVEKIECSI VTNNNDKKLE AEEDDEDVQL PGFRFHPTDE ELVGFYLPRK VEKRPIALQL 60
IKEMDIYKYD PWDLPQGSNK GENEWYYYCK RGRKYKNSVR PNRVTAGSGF WKATGTDKPI 120
YSKGEVIGLK KSLVYYRGSA GKGTKTEWMM HEFRLSNNRH LHAANTIAQE AEAWTLCRVL 180
KRNGSYRKFI PDWKEVAASK KRNAVPKICN NYNIDSSNNS QFYISFSTPR VSDIHAENKQ 240
LLNVGSGSIN DETMISTVAA AASNSNTPLG FNEWLDNENW DELRSIFDLS FDPYS
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-52 | 22 | 188 | 7 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-52 | 22 | 188 | 7 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-52 | 22 | 188 | 7 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-52 | 22 | 188 | 7 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-52 | 22 | 188 | 10 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 5e-52 | 22 | 188 | 10 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 5e-52 | 22 | 188 | 10 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 5e-52 | 22 | 188 | 10 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 5e-52 | 22 | 188 | 10 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 5e-52 | 22 | 188 | 10 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 5e-52 | 22 | 188 | 10 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 5e-52 | 22 | 188 | 10 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 5e-52 | 22 | 188 | 7 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 5e-52 | 22 | 188 | 7 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
