 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Niben101Scf03990g01008.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
S1Fa-like |
| Protein Properties |
Length: 129aa MW: 14489 Da PI: 10.1025 |
| Description |
S1Fa-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf03990g01008.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | S1FA | 130.7 | 4e-41 | 63 | 129 | 4 | 70 |
S1FA 4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
+ ve+kG+nPGlivl vvggl+l fl+gny+ly+yaqk+lPP+kkkPvskkk+kre+lkqGv++PGe
Niben101Scf03990g01008.1 63 KDVEVKGFNPGLIVLTVVGGLVLAFLIGNYVLYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE 129
679***************************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 129 aa
Download sequence Send
to blast |
MKLIFDPHLA VTIKWYLTQS SESILSSISD YIAFFRRSVF EGMDSEADFD PPPSFDNVKN 60
MAKDVEVKGF NPGLIVLTVV GGLVLAFLIG NYVLYMYAQK TLPPKKKKPV SKKKMKRERL 120
KQGVSAPGE
|
| Functional Description ? help
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| Source |
Description |
| UniProt | DNA-binding protein that specifically recognizes a negative element (S1F) within the RPS1 promoter. {ECO:0000250}. |
