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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Niben101Scf03942g02002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
MYB_related |
Protein Properties |
Length: 345aa MW: 36705.8 Da PI: 6.448 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf03942g02002.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 29.9 | 1.3e-09 | 119 | 155 | 3 | 39 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39
+WT+eE+ l++ + ++lG+g+W+ I+r + + Rt+ q
Niben101Scf03942g02002.1 119 PWTEEEHRLFLLGLQKLGKGDWRGISRNFVTSRTPTQ 155
8****************************99999865 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MTRRCSHCNN NGHNSRTCPT TRGGTPTGGV GSSSGGGGGA SGGVRLFGVR LTDGSIMKKS 60 ASMGNLSSLH SYHSSSSPNP PGSPSSDGPH LPDGYLSDDP NTHASISANR RLERKKGVPW 120 TEEEHRLFLL GLQKLGKGDW RGISRNFVTS RTPTQGTDAS HPLPEEQFML PPRAIESDKE 180 HLAPSATKAI ETDFADSLPS LDLSLKSDFE SMETTPSEPV EEAKPNTTTN EIPSVFPAFL 240 PAYIPVPYSF WPSNAVPVPE DRGAEPSHHQ ILKPIPTVPK EPVNVDELVG MSQLTLVDAG 300 SGHIEPSPLS LKLTAEPSRQ SAFHASTPVK SSEITKGETA PIQAV
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