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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Niben101Scf03915g02001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
NAC |
| Protein Properties |
Length: 172aa MW: 20625.2 Da PI: 4.546 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf03915g02001.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 64.7 | 2.7e-20 | 2 | 104 | 17 | 128 |
NAM 17 eyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99
+yLk kv+g ++ l+ i+ +d ++P+++++k+ ++++wyfFs+ ++nrat++gyWk+ +++++ +++
Niben101Scf03915g02001.1 2 YYLKSKVAGLSFYLSINIPYIDFSFSDPSEINEKALWSKNQWYFFSQV--------KENRATRKGYWKEVHMNEPIILGnfGEKM 78
8**********999888**************977777899*****997........45899***************998888999 PP
NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
vg+kk +v+y+ + ++t+W+m+e++l
Niben101Scf03915g02001.1 79 VGIKKYFVYYNID---EVQTNWIMEEFHL 104
**********544...467********98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MYYLKSKVAG LSFYLSINIP YIDFSFSDPS EINEKALWSK NQWYFFSQVK ENRATRKGYW 60
KEVHMNEPII LGNFGEKMVG IKKYFVYYNI DEVQTNWIME EFHLSISNSF KKPSKKRENE 120
MEWVLCRVHE SNNQTQGINW LYRNCDDEVE LSALDEVFLS MDDDEEEEIS FP
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-15 | 3 | 136 | 34 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-15 | 3 | 136 | 34 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-15 | 3 | 136 | 34 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-15 | 3 | 136 | 34 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-15 | 3 | 136 | 37 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 5e-15 | 3 | 136 | 37 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 5e-15 | 3 | 136 | 37 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 5e-15 | 3 | 136 | 37 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 5e-15 | 3 | 136 | 37 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 5e-15 | 3 | 136 | 37 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 5e-15 | 3 | 136 | 37 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 5e-15 | 3 | 136 | 37 | 173 | NAC domain-containing protein 19 |
| 4dul_A | 5e-15 | 3 | 136 | 34 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 5e-15 | 3 | 136 | 34 | 170 | NAC domain-containing protein 19 |
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