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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Niben101Scf03739g05005.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WRKY |
| Protein Properties |
Length: 249aa MW: 28830.9 Da PI: 5.0958 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf03739g05005.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 30.5 | 7.2e-10 | 98 | 151 | 9 | 59 |
EEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 9 KYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
K G K +g r Y+rC+++ +C+++k+v++ +e+p + ++tY g+H+++
Niben101Scf03739g05005.1 98 KQGGKGRRGCYKRRCYFRCAHKydqDCRATKQVQTIQENPIIYQTTYFGQHTCN 151
6688888999999********99999**************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MKKRLVHQNP RKNRVIKELV EGKRSTTQLQ TLLQQPIADH GYSVSADELL LKIWRSFNEA 60
ITELNTWGLA FQIEEVDQPD SGDLKSNDST SELKKNDKQG GKGRRGCYKR RCYFRCAHKY 120
DQDCRATKQV QTIQENPIIY QTTYFGQHTC NSVKIPKHEM ESSSFEVKQI LPSSDTIDSS 180
LDSTVKEEEQ ESKVQSDESS TMDSNLWQEF AHDSIMADHS SYFERVISSD MEDFDKFSDF 240
HFDEAIEFS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Required for the resistance (R) gene Mi-1-mediated resistance to potato aphid (e.g. M.euphorbiae) and root-knot nematode (e.g. M.javanica) (PubMed:21898085). {ECO:0000250|UniProtKB:Q9LY00, ECO:0000250|UniProtKB:Q9SUP6, ECO:0000269|PubMed:21898085}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced in response to potato aphid (e.g. M.euphorbiae) infestation and root-knot nematode (e.g. M.javanica) inoculation. Up-regulated by salicylic acid (SA) and suppressed by methyl jasmonate (MeJA). {ECO:0000269|PubMed:21898085}. |
