PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Niben101Scf03282g02006.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 240aa MW: 24735.9 Da PI: 9.63

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf03282g02006.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	113.6	3.2e-35	26	120	6	95
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.....eeaeaagss 85 ++++ E+E++k RER+RRai++ki+ GLR++G+y+l r+D+n+Vl+ L+ eAGw+v++DGttyr +s+ + + ++g+s Niben101Scf03282g02006.1 26 RRSAVEKEKTKMRERQRRAITTKIFNGLRKHGGYRLSPRSDINQVLRHLASEAGWIVDPDGTTYRSSSSSTnnnscPHCGVGGKS 110 45678************************************************************88877754333333455666 PP DUF822 86 asaspesslq 95 + a+p+ss+ Niben101Scf03282g02006.1 111 SAATPTSSSV 120 6666666643 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.9E-31	27	120	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence Send to blast
MKESAAGQER SNNSNGGYGS TNNNGRRSAV EKEKTKMRER QRRAITTKIF NGLRKHGGYR 60 LSPRSDINQV LRHLASEAGW IVDPDGTTYR SSSSSTNNNS CPHCGVGGKS SAATPTSSSV 120 GPTSGGGGEC STTASPFLAT PNGGDTKTTY SRTPTTHLFD SGFSLSGGVS TSALLSSSSS 180 ETLLSIYMSG AGGGAAGGGI SGLYHPSSAA SATVHHEEQP SYLLQEVRAS NQNTPVVSPL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009783609.1	1e-124	PREDICTED: beta-amylase 7-like isoform X1
Refseq	XP_009783610.1	1e-124	PREDICTED: beta-amylase 7-like isoform X1
TrEMBL	A0A1U7XAY1	1e-122	A0A1U7XAY1_NICSY; beta-amylase 7-like isoform X1
STRING	XP_009783609.1	1e-123	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15594	6	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	3e-20	beta-amylase 7