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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Niben101Scf03204g02006.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
NAC |
| Protein Properties |
Length: 347aa MW: 39195.9 Da PI: 8.0646 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf03204g02006.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 167.6 | 4.1e-52 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
lppGfrF Ptdeel+v+yL++kv+g++++l ++i+e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWka
Niben101Scf03204g02006.1 14 LPPGFRFYPTDEELLVQYLCRKVAGHDFSL-QIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKA 97
79***************************9.89***************7777799****************************** PP
NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
tg+dk +++ +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
Niben101Scf03204g02006.1 98 TGTDKIITT-EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
*****9999.999****************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MGVQEMDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGHD FSLQIIAEID LYKFDPWVLP 60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY 120
VGKAPKGTKT NWIMHEYRLS ESPRKNGSSR LDEWVLCRIY KKKSGGQKPN ISGLNNKEIS 180
HGSPSSCSSQ FDDMLESLPE IEDRYFSLPR MNSLRNLQQD DKLNLQHLGS GNFDWATLAG 240
FNTFPELVTG NQAPAPGNQS QVHLNNQNSG NNLNEFFAHP TQLNFHGDVK FEGGVDEEVE 300
SGIRAQRINN SGFYQENSTG LQAYTNSVPD PFAIRYPTQT VNMGFSR
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-110 | 1 | 168 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-110 | 1 | 168 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-110 | 1 | 168 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-110 | 1 | 168 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-110 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-110 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-110 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-110 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-110 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-110 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-110 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-110 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-110 | 1 | 168 | 4 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-110 | 1 | 168 | 4 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates wounding-responsive genes (PubMed:28733419). Involved in jasmonate- and coronatine-mediated stomatal reopening in response to Pseudomonas syringae pv tomato DC3000 infection (PubMed:25005917). Regulates the expression of threonine deaminase 2 (TD2) through promoter binding (PubMed:28733419). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA) (PubMed:25005917, PubMed:28733419, PubMed:30610166). Induced by wounding (PubMed:28733419, PubMed:25005917). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28733419). Induced by coronatine (PubMed:25005917). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419, ECO:0000269|PubMed:30610166}. |
