PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf03150g03007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 379aa MW: 41592.1 Da PI: 6.993 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.9 | 1.1e-28 | 222 | 273 | 1 | 52 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQ+ Niben101Scf03150g03007.1 222 KQRRCWSPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQQ 273 79*************************************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.785 | 219 | 279 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 7.6E-24 | 220 | 273 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 7.7E-14 | 220 | 273 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.2E-24 | 222 | 272 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.9E-6 | 224 | 273 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence Send to blast |
MMINNHENNY SEKMQRCQQY IDALEQERKK IQVFSRELPL CLELVTQAIE TYKQQLSGTT 60 TEYNINTQSD VECSEEHTSS DVPILEEFIP LKRTFSHEDE DEDERDSHKS KTYNISDTSC 120 SKDNKNSDKS CKKSDWLRSV QLWNNNQTPD PTPKEELTPK KVAVVEVKKN GSGGAFHPFK 180 KEKSTAAAIE ASTSAVVMAA AASSTAETGS GSKKEEKDEK RKQRRCWSPE LHRRFLQALQ 240 QLGGSHVATP KQIRELMKVD GLTNDEVKSH LQQPPQFVVV GGIWVPPPEY SGMAAAAPSA 300 SGEASGVANS NGIYAPIATL PKGPLHDISG GTLKQRQHNI KPSRSSERGS GSHSDGGGVH 360 SNSPATSSST HTTTASPPY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00160 | DAP | Transfer from AT1G25550 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019256850.1 | 0.0 | PREDICTED: myb family transcription factor EFM-like | ||||
Swissprot | Q9FPE8 | 5e-88 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A1J6HTQ8 | 0.0 | A0A1J6HTQ8_NICAT; Myb family transcription factor efm | ||||
STRING | XP_009788853.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5219 | 24 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 1e-65 | G2-like family protein |
Publications ? help Back to Top | |||
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