 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Niben101Scf02340g06003.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
NAC |
| Protein Properties |
Length: 245aa MW: 27604.1 Da PI: 6.292 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf02340g06003.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 158.8 | 2.1e-49 | 15 | 136 | 1 | 122 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
lppGfrFhPtdeelvv+yLkkkv++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g+r+nra++sgyWka
Niben101Scf02340g06003.1 15 LPPGFRFHPTDEELVVHYLKKKVASAPLPV-KIIAEVDLYKFDPWELPSKANFGEQEWYFFSPRDRKYPNGTRPNRAATSGYWKA 98
79****************************.89***************99999******************************** PP
NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWv 122
tg dk++++ +++++g+kktLvfykg+ pkg k++W+
Niben101Scf02340g06003.1 99 TGIDKPIYTCgGTKKIGVKKTLVFYKGKPPKGIKSNWL 136
********9867788**********************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MESTGLMSGS SHLQLPPGFR FHPTDEELVV HYLKKKVASA PLPVKIIAEV DLYKFDPWEL 60
PSKANFGEQE WYFFSPRDRK YPNGTRPNRA ATSGYWKATG IDKPIYTCGG TKKIGVKKTL 120
VFYKGKPPKG IKSNWLDDWV LCRIYNKNSS STIEMDEEDS IADTTGSTSI LPALSKNYFE 180
QNPSIGALRV GSNFDEYFEN DMKMEKNEYE NGDDTSLMEG NSSSFLTMLN QISPRSSQLN 240
SLFSG
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor of the NAC family associated with male fertility. {ECO:0000250}. |
| UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
