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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Niben101Scf02155g02006.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
NF-YC |
Protein Properties |
Length: 249aa MW: 27491 Da PI: 6.5281 |
Description |
NF-YC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf02155g02006.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YC | 179 | 4.4e-56 | 37 | 141 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaa 82
ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa
Niben101Scf02155g02006.1 37 QLQMFWTYQrqeIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAA 121
89*****998899************************************************************************ PP
NF-YC 83 vtrtdifdflvdivprdelk 102
+trtdifdflvdivprde+k
Niben101Scf02155g02006.1 122 ITRTDIFDFLVDIVPRDEIK 141
*****************975 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MENNQQSAAN AAAAAAAAAA YPAQPPYHHL LQQQQQQLQM FWTYQRQEIE QVNDFKNHQL 60 PLARIKKIMK ADEDVRMISA EAPILFAKAC ELFILELTIR SWLHAEENKR RTLQKNDIAA 120 AITRTDIFDF LVDIVPRDEI KEEGGVGLGP AGIVGSTASG VPYYYPPMGQ PAPPGVMMGR 180 PAMPGVDPSM YVQPPPSQAW QSVWQTAEDN SYASGGSSGQ GNLDGQRKTV PKKEVRRNGR 240 TSSTEESRL
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Functional Description ? help
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Source |
Description |
UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |