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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf01887g00004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 260aa MW: 29874.7 Da PI: 4.7734 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 72.6 | 9.9e-23 | 6 | 124 | 6 | 128 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +F+P+d el+ + L k ++gk l++e i d+y+ ePw+L ++k yf ++ +kk++t+ r nr+t +g W ++ k k Niben101Scf01887g00004.1 6 QFRPSDTELILQ-LLKFLAGKCLPTEGLIGFEDVYSKEPWQLI---GDTKKTKYFLTQLKKKKPTDARFNRTTCNGSWTQQNKGK 86 6*********88.556788999999899**************6...4456788******************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 e++++ ++ +g k++L + +r+ ++ + +W+m ey l Niben101Scf01887g00004.1 87 EIVDEdENLIIGYKRSLSYK-NRKDSSLSGRWLMMEYFL 124 ****8444559*******97.7888889*********76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 26.276 | 1 | 148 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.2E-11 | 6 | 123 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.57E-22 | 6 | 147 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MENNGQFRPS DTELILQLLK FLAGKCLPTE GLIGFEDVYS KEPWQLIGDT KKTKYFLTQL 60 KKKKPTDARF NRTTCNGSWT QQNKGKEIVD EDENLIIGYK RSLSYKNRKD SSLSGRWLMM 120 EYFLADSLLQ QLKSNEAKEF VICAIKKNPR SELRGNSIAT VVEYKRFIDR VLQEPSHQST 180 MIFSNNNPMM VESTSSDAFS VEQLESKDGM LVQTDSDGFF GMLNVENQEC YYHEGDEVEV 240 DWDSLLDFGG RGLVQSDLLY |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019238036.1 | 1e-175 | PREDICTED: uncharacterized protein LOC109218154 | ||||
TrEMBL | A0A1J6KJL4 | 1e-174 | A0A1J6KJL4_NICAT; Nac domain-containing protein 41 | ||||
STRING | XP_009628603.1 | 1e-152 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9815 | 7 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 4e-16 | NAC domain containing protein 83 |