PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf01812g04009.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 422aa MW: 47447.5 Da PI: 10.0533

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf01812g04009.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.9	2.8e-15	256	298	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk Niben101Scf01812g04009.1 256 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLKR 298 79***************************************85 PP
2	bZIP_1	49.2	1.1e-15	352	396	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk + Niben101Scf01812g04009.1 352 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLKR-QK 396 79*************************************9994.33 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.6E-14	249	299	No hit	No description
SMART	SM00338	9.9E-12	252	310	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.634	254	299	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.13E-10	256	299	No hit	No description
CDD	cd14707	3.75E-22	256	310	No hit	No description
Pfam	PF00170	6.6E-13	256	298	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	259	274	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.4E-14	345	395	No hit	No description
SMART	SM00338	7.0E-13	348	416	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.634	350	395	IPR004827	Basic-leucine zipper domain
CDD	cd14707	3.53E-22	352	400	No hit	No description
SuperFamily	SSF57959	1.5E-10	352	398	No hit	No description
Pfam	PF00170	2.0E-12	352	395	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	355	370	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence Send to blast
MVTHGMGSQG GVGGGKEAKP NALARQGSLY SLTLDEVQNQ LGNFGKPLNS MNLDELVKTV 60 WTIEACQELG GNDYGGAQHG TNSLHRQSSG ITMSRDLSKK TVDEVWQDIQ QGQKRDSSIG 120 KRSQERQLTF GEITLEDFLV KAGVIAESTQ GRRISGLVLG VDSMSLAQQA QWPHYQIPTM 180 HQAPEQQLQQ QQNIVPVFMP GHPVQQPLPV VANPIVDPET QMTMSPSHLM GTLSDTQTSG 240 RKRIAPEDVI EKSVERRQKR MIKNRESAAR SRARKQAYTH ELENKVSRLE EENERLKRQK 300 LEGLXVVANP IVDPETQMTM SPSHLMGTLS DTQTSGRKRI APEDVIEKSV ERRQKRMIKN 360 RESAARSRAR KQAYTHELEN KVSRLEEENE RLKRQKEMEK ILPSVPPPEP KYQLRRTSSG 420 PI

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence Send to blast

MVTHGMGSQG GVGGGKEAKP NALARQGSLY SLTLDEVQNQ LGNFGKPLNS MNLDELVKTV  60
WTIEACQELG GNDYGGAQHG TNSLHRQSSG ITMSRDLSKK TVDEVWQDIQ QGQKRDSSIG  120
KRSQERQLTF GEITLEDFLV KAGVIAESTQ GRRISGLVLG VDSMSLAQQA QWPHYQIPTM  180
HQAPEQQLQQ QQNIVPVFMP GHPVQQPLPV VANPIVDPET QMTMSPSHLM GTLSDTQTSG  240
RKRIAPEDVI EKSVERRQKR MIKNRESAAR SRARKQAYTH ELENKVSRLE EENERLKRQK  300
LEGLXVVANP IVDPETQMTM SPSHLMGTLS DTQTSGRKRI APEDVIEKSV ERRQKRMIKN  360
RESAARSRAR KQAYTHELEN KVSRLEEENE RLKRQKEMEK ILPSVPPPEP KYQLRRTSSG  420
PI

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019225772.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	3e-79	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A314KT95	0.0	A0A314KT95_NICAT; Abscisic acid-insensitive 5-like protein 2
STRING	XP_009789729.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3334	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	3e-81	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]