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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf01764g02015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | B3 | ||||||||
Protein Properties | Length: 250aa MW: 28528.5 Da PI: 6.0742 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 30.7 | 5.4e-10 | 95 | 184 | 1 | 83 |
EEEE-..-HHHHT..T-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT- CS B3 1 ffkvltpsdvlks..grlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangL 74 f k+lt+ d ++ g l lp k +++ +g ++k ltl d +g++W++ + ks++y+l++ W ++v+ +L Niben101Scf01764g02015.1 95 FSKKLTKYDLKRRfgGGLKLPLKLVTDKilvhisapaDGG--KGKPLTLVDHEGKKWNMLF--VLKSKKYYLRGKWYDYVEKYEL 175 6677766555555888899999999888899999877444..4556***************..888999**************** PP -TT-EEEEE CS B3 75 kegDfvvFk 83 k+ D+++++ Niben101Scf01764g02015.1 176 KDSDTIIIE 184 ******998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 8.9E-13 | 88 | 189 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 2.43E-10 | 94 | 186 | No hit | No description |
SuperFamily | SSF101936 | 1.04E-12 | 94 | 190 | IPR015300 | DNA-binding pseudobarrel domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MAPTVTEAMY QNLSTASLQF NDCNLIIKNV SKMKESGQET DAIVNSRDIV HEGILEKVRD 60 EETIITNEKR MEDHTLQFTN SGGQMTTSTK REEIFSKKLT KYDLKRRFGG GLKLPLKLVT 120 DKILVHISAP ADGGKGKPLT LVDHEGKKWN MLFVLKSKKY YLRGKWYDYV EKYELKDSDT 180 IIIEKVTISK EQVKEEVDFA AVNQIGNHDW DTIYPKSAGE YQQIEIKAEV DVEVEYEITI 240 KRGPGNTATE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009791938.1 | 1e-121 | PREDICTED: uncharacterized protein LOC104239105 | ||||
TrEMBL | A0A314L790 | 1e-129 | A0A314L790_NICAT; Uncharacterized protein | ||||
STRING | XP_009791938.1 | 1e-120 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14765 | 2 | 3 |