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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf01689g07011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 197aa MW: 22140.9 Da PI: 9.5164 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.9 | 5.8e-10 | 18 | 67 | 9 | 57 |
CHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 9 rkqkNReAArrsRqRKkaeieeLe.ekvkeLeaeNkaLkkeleelkkeva 57 r+ +NRe+ArrsR+RK+a + eLe +k e N+ Lk +e+l+ +v+ Niben101Scf01689g07011.1 18 RMLSNRESARRSRRRKQAHLTELEtQKYNEAAVDNRVLKADVETLRAKVK 67 9**********************956899999999999999999988776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.9E-4 | 8 | 75 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.05E-7 | 16 | 67 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-8 | 16 | 71 | No hit | No description |
Pfam | PF00170 | 5.8E-8 | 17 | 67 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 18 | 32 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 3.7E-44 | 61 | 186 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence Send to blast |
MASLSGYNPN ILCQHIDRML SNRESARRSR RRKQAHLTEL ETQKYNEAAV DNRVLKADVE 60 TLRAKVKMAE ETVKRVTGLN PLFQAMSEIS TMMMPSFTGS PFDSSADAAV PEQDDPRHHY 120 YQAPENSHMP SHTPRMQNGM IDIPSMENAH QSSAAEAIGG NKIGRTSSMQ RVASLEHLQK 180 RMRGEASTCG TQRRKEQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 26 | 33 | RRSRRRKQ |
2 | 28 | 33 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016476165.1 | 1e-123 | PREDICTED: light-inducible protein CPRF2-like | ||||
Swissprot | Q99090 | 5e-64 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | A0A1S4AHI8 | 1e-122 | A0A1S4AHI8_TOBAC; light-inducible protein CPRF2-like | ||||
STRING | XP_009623820.1 | 1e-114 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2934 | 24 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.1 | 3e-30 | bZIP family protein |
Publications ? help Back to Top | |||
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