PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf01607g03007.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 306aa    MW: 34705.6 Da    PI: 6.4084
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf01607g03007.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.96.9e-11179223549
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                               kr +r   NR +A+rsR RK++++ eLe+ v +L+ae + L  ++
  Niben101Scf01607g03007.1 179 KRIKRILANRQSAQRSRVRKLQYVSELERSVSTLQAEVSVLSPRV 223
                               999**********************************88777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-14175239IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.783177240IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-11179231No hitNo description
PfamPF001701.4E-9179223IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.33E-11179233No hitNo description
CDDcd147032.11E-21180230No hitNo description
PROSITE patternPS000360182197IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MAHLPPRIPN TRPNWPDFSL QKLDNLSPNA TAAHNNPLWA DEFLDFSSKR GSHRRSMSDS  60
IAFLETPMVE ECRRLSSTPG SGGTSTGNQE FERFDDEQQI MSMFNDDEHD NISCSTPQSP  120
SDYINVNEDN KRMNVAGGYR DGQMQQLNEE VQSSCKTNEE PAATHASIEY SCEKVVDPKR  180
IKRILANRQS AQRSRVRKLQ YVSELERSVS TLQAEVSVLS PRVAFLDHQR LVLNADNSAL  240
RQRIAALAQD KLFKDAHQEA LKREIERLRQ IYYQQNLKQI ENGTQSKSQP PVADSSAAEM  300
KVQLVN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009770905.10.0PREDICTED: basic leucine zipper 61-like
SwissprotQ9M2K41e-100BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A1U7W9I40.0A0A1U7W9I4_NICSY; basic leucine zipper 61-like
STRINGXP_009770905.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17752465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-100bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]