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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Niben101Scf01594g02012.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
NAC |
| Protein Properties |
Length: 195aa MW: 23168.1 Da PI: 4.3862 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf01594g02012.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 99.6 | 4.6e-31 | 9 | 127 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
+ppGf F+Ptdeel+++yLk kv+g ++ + i+ +di +++P+++++k+ ++++wyfFs+ ++nrat++gyWk+
Niben101Scf01594g02012.1 9 VPPGFCFDPTDEELIMYYLKSKVTGLPFYPSINIPYIDISSSHPSEINEKALWSKNQWYFFSQV--------KENRATRKGYWKE 85
69*************************888788**************977777899*****997........45899******** PP
NAM 86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++++ +++ vg+kk +v+y+ + ++t+W+m+e++l
Niben101Scf01594g02012.1 86 VHMNEPIILGnfGEKMVGIKKYFVYYNID---EVQTNWIMEEFHL 127
*******998888999**********544...467********98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 195 aa
Download sequence Send
to blast |
MEDERVIGVP PGFCFDPTDE ELIMYYLKSK VTGLPFYPSI NIPYIDISSS HPSEINEKAL 60
WSKNQWYFFS QVKENRATRK GYWKEVHMNE PIILGNFGEK MVGIKKYFVY YNIDEVQTNW 120
IMEEFHLSIS NSFKKPSKKR ENEMEWVLCR VHESNNQTQG INWLYRNCDD EVELSALDEV 180
FLSMDDDEEE EISFP
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-21 | 7 | 159 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-21 | 7 | 159 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-21 | 7 | 159 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-21 | 7 | 159 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-21 | 7 | 159 | 18 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 2e-21 | 7 | 159 | 18 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 2e-21 | 7 | 159 | 18 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 2e-21 | 7 | 159 | 18 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 2e-21 | 7 | 159 | 18 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 2e-21 | 7 | 159 | 18 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 2e-21 | 7 | 159 | 18 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 2e-21 | 7 | 159 | 18 | 173 | NAC domain-containing protein 19 |
| 3ulx_A | 3e-21 | 7 | 157 | 13 | 171 | Stress-induced transcription factor NAC1 |
| 4dul_A | 3e-21 | 7 | 159 | 15 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 3e-21 | 7 | 159 | 15 | 170 | NAC domain-containing protein 19 |
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