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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf01498g06001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 214aa MW: 24860.8 Da PI: 6.7232 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 32.4 | 2.6e-10 | 36 | 116 | 55 | 128 |
NAM 55 ekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk......kgel..vglkktLvfykg..rapkgektdWvmheyrl 128 ++ yf +k ++k ++ r +r + ++g+Wk+ kdk+v+ k + + +g k+ L + ++ ++ + +W+m+ey+l Niben101Scf01498g06001.1 36 TNYRYFITKLKEK--SNARYHRsVGNKGTWKQEAKDKPVHYKnmgntsS--VvnIGSKTCLSYKNKkfYPEDQKDGHWLMKEYEL 116 2233555554444..45677775888**************996655433..156*********95522455566789******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.212 | 1 | 139 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.44E-8 | 35 | 137 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-6 | 39 | 116 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MHDSGFITTN VDVYGKQERW EIYDNGVPNG DDYDSTNYRY FITKLKEKSN ARYHRSVGNK 60 GTWKQEAKDK PVHYKNMGNT SSVVNIGSKT CLSYKNKKFY PEDQKDGHWL MKEYELSKVI 120 VHKFDQDRRD YVLCAIKKLK HFNSTSETST TTTMLNFDQS VLPDMRSNSA HVVYSEVADH 180 MTYMSQINSK KVPEDVLGLD PWDIMVSDEL EDVP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009795944.1 | 1e-128 | PREDICTED: protein ATAF2-like | ||||
TrEMBL | A0A1J6IHC9 | 1e-129 | A0A1J6IHC9_NICAT; Uncharacterized protein | ||||
STRING | XP_009795944.1 | 1e-127 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2219 | 12 | 54 |