PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf01442g01009.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 453aa MW: 50258.4 Da PI: 6.2029

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf01442g01009.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.8	4.1e-07	109	171	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r rr NRe+Ar +R++a +eeL++k++ L eNk Lkk+ e e+++l++++ Niben101Scf01442g01009.1 109 EKEGRRLRRVSANRESARQTIRRRQAMQEELRRKAADLALENKNLKKNKELAAAEYSSLRNKN 171 688899*****************************************999*****9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.1E-4	109	173	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.496	111	174	IPR004827	Basic-leucine zipper domain
CDD	cd14702	1.47E-11	114	165	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence Send to blast
MNYEEIHKTA LCAADGRFSD DELVECEWEA AEALACLSHP VTGDVHLCMD AWDAAGLYST 60 TSAMLLFIQE QEIAIRSEDE SELDTSPLCA SNYPPVTSGK SRQDLTEAEK EGRRLRRVSA 120 NRESARQTIR RRQAMQEELR RKAADLALEN KNLKKNKELA AAEYSSLRNK NNSLKTQMDK 180 IVKAEVQETD DESKLTPVGT PSTSTTFPTF LHNQTQATLF FWSFQSVDDL PLQSGSQSIS 240 GIAQQLHTPL GEFKTSDKLE SPTMMSKPET PLYILAFPCP MPFHAQSNSF YPPSTNHNDQ 300 HETSVVHECS STSTPRTTVN MENHLTTAPL KVEVETTDSI DAIHGDILRE AESGYLLNVG 360 ASEGSGKLLG VRSKRMFQMT VTSSPSIQPV IARQSDYPQQ DKVTSSARGH VAGTSPKMSQ 420 EHLSCSSNVP IDVITAAKAR RKRKELMKLK KQF

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence Send to blast

MNYEEIHKTA LCAADGRFSD DELVECEWEA AEALACLSHP VTGDVHLCMD AWDAAGLYST  60
TSAMLLFIQE QEIAIRSEDE SELDTSPLCA SNYPPVTSGK SRQDLTEAEK EGRRLRRVSA  120
NRESARQTIR RRQAMQEELR RKAADLALEN KNLKKNKELA AAEYSSLRNK NNSLKTQMDK  180
IVKAEVQETD DESKLTPVGT PSTSTTFPTF LHNQTQATLF FWSFQSVDDL PLQSGSQSIS  240
GIAQQLHTPL GEFKTSDKLE SPTMMSKPET PLYILAFPCP MPFHAQSNSF YPPSTNHNDQ  300
HETSVVHECS STSTPRTTVN MENHLTTAPL KVEVETTDSI DAIHGDILRE AESGYLLNVG  360
ASEGSGKLLG VRSKRMFQMT VTSSPSIQPV IARQSDYPQQ DKVTSSARGH VAGTSPKMSQ  420
EHLSCSSNVP IDVITAAKAR RKRKELMKLK KQF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	439	444	RRKRKE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016477078.1	0.0	PREDICTED: uncharacterized protein LOC107798583
TrEMBL	A0A1S4AKX4	0.0	A0A1S4AKX4_TOBAC; uncharacterized protein LOC107798583
STRING	XP_009598545.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5417	17	24

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	7e-12	bZIP family protein