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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Niben101Scf01330g01003.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
NAC |
| Protein Properties |
Length: 325aa MW: 36401.9 Da PI: 8.903 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf01330g01003.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 175.1 | 2e-54 | 12 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
lppGfrFhPtdeel+++yL +k+++ +++ ++i+++d++k+ePwdLp k+k + kewyfFs rd+ky+tg r+nrat+sgyWk+
Niben101Scf01330g01003.1 12 LPPGFRFHPTDEELITYYLVNKISDASFTG-RAIADADLNKSEPWDLPGKAKMGGKEWYFFSLRDRKYPTGVRTNRATNSGYWKT 95
79*************************999.89***************999999******************************* PP
NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
tgkdke++++ ++elvg+kktLvfykgrap+gek++Wvmheyr+
Niben101Scf01330g01003.1 96 TGKDKEIFNSkTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRI 139
********9867888***************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MELEVNKEES SLPPGFRFHP TDEELITYYL VNKISDASFT GRAIADADLN KSEPWDLPGK 60
AKMGGKEWYF FSLRDRKYPT GVRTNRATNS GYWKTTGKDK EIFNSKTSEL VGMKKTLVFY 120
KGRAPRGEKS NWVMHEYRIR SKSSYRTNKQ DEWVVCRIFQ KSAGMKKYPT NHSRTVVNPY 180
SLEINPNAMS SQIMMQPDHG FQFSMGRNDI NHASNYTNNF PIQHPQMNYN IGGSSSSGGG 240
GGDNFFTISG LNLNLGGGAA ASSQPVLRLM PLPPPPPPQV MNVQQEVMTS SMLDNCAITS 300
EAAGYGAEMN SAHYCADLDN YWATY
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-55 | 11 | 167 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-55 | 11 | 167 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-55 | 11 | 167 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-55 | 11 | 167 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 4e-55 | 9 | 167 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 4e-55 | 9 | 167 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 4e-55 | 9 | 167 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 4e-55 | 9 | 167 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 4e-55 | 9 | 167 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 4e-55 | 9 | 167 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 4e-55 | 9 | 167 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 4e-55 | 9 | 167 | 17 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 3e-55 | 11 | 167 | 16 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 3e-55 | 11 | 167 | 16 | 171 | NAC domain-containing protein 19 |
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