PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf01094g01010.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

VOZ

Protein Properties

Length: 463aa MW: 51594 Da PI: 5.7282

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf01094g01010.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	371.3	3e-114	195	402	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipeceg 82 pppsaflgpkc+lwdc+rpa gs+w+q dycs +ha+la neg pgt pv+rp gi+lkd+llf+alsak+qgk+vgipece Niben101Scf01094g01010.1 195 PPPSAFLGPKCSLWDCPRPAMGSDWCQkshDYCSDYHASLAPNEGYPGTPPVVRPMGIGLKDNLLFQALSAKAQGKDVGIPECE- 278 89*********************976668************************************************8. PP VOZ 83 aatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfew 167 elfdl+++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+ glkrsyymdpqp++++ew Niben101Scf01094g01010.1 279 -----------ELFDLKVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYRGLKRSYYMDPQPMKNLEW 352 ...........9********************************************************************* PP VOZ 168 hlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 hlyeyein++da+alyrlelklvd+kks+kgkv+k+s+adlqk++grlta Niben101Scf01094g01010.1 353 HLYEYEINKYDACALYRLELKLVDGKKSPKGKVTKESVADLQKQMGRLTA 402 **********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence Send to blast
RQHFDPPYLP IEGFVSSALI GMGKGSKSGA GKTASHQLFK DKAKNRVDDL QGVFTNLQSA 60 RKESRTYDVG VLEEQGGSRV SSDIYRLLLG EEEDDATSAL AAPKPEPDAQ KNDVAAFQEG 120 FNVTPVLQEQ GYQLVDQSKS MPLVVNNAVI NNLGIATQKD YNSFDLQQDF DQYFPGFDAL 180 NLCLEDVLPP VHISPPPSAF LGPKCSLWDC PRPAMGSDWC QKSHDYCSDY HASLAPNEGY 240 PGTPPVVRPM GIGLKDNLLF QALSAKAQGK DVGIPECEEL FDLKVVEGET IREWLFFDKP 300 RRAFESGNRK QRSLPDYNGR GWHESRKQVM NEYRGLKRSY YMDPQPMKNL EWHLYEYEIN 360 KYDACALYRL ELKLVDGKKS PKGKVTKESV ADLQKQMGRL TAEFPSENKR SVKGRAKANS 420 KDVAINTHAV PNLTVPASEG LDYGTGAPFP DYLVDNLGGY YVT

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence Send to blast

RQHFDPPYLP IEGFVSSALI GMGKGSKSGA GKTASHQLFK DKAKNRVDDL QGVFTNLQSA  60
RKESRTYDVG VLEEQGGSRV SSDIYRLLLG EEEDDATSAL AAPKPEPDAQ KNDVAAFQEG  120
FNVTPVLQEQ GYQLVDQSKS MPLVVNNAVI NNLGIATQKD YNSFDLQQDF DQYFPGFDAL  180
NLCLEDVLPP VHISPPPSAF LGPKCSLWDC PRPAMGSDWC QKSHDYCSDY HASLAPNEGY  240
PGTPPVVRPM GIGLKDNLLF QALSAKAQGK DVGIPECEEL FDLKVVEGET IREWLFFDKP  300
RRAFESGNRK QRSLPDYNGR GWHESRKQVM NEYRGLKRSY YMDPQPMKNL EWHLYEYEIN  360
KYDACALYRL ELKLVDGKKS PKGKVTKESV ADLQKQMGRL TAEFPSENKR SVKGRAKANS  420
KDVAINTHAV PNLTVPASEG LDYGTGAPFP DYLVDNLGGY YVT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009776508.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_009776509.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_016491038.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_016491039.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-173	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S4BQG3	0.0	A0A1S4BQG3_TOBAC; transcription factor VOZ1-like
TrEMBL	A0A1U7WPA8	0.0	A0A1U7WPA8_NICSY; transcription factor VOZ1-like
STRING	XP_009776508.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-173	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]