![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Niben101Scf00902g03004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 112aa MW: 12560 Da PI: 6.0955 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 14.8 | 5.1e-05 | 19 | 39 | 1 | 21 |
TT--SS--HHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFek 21 ++ R+++t+eq+++L elF++ Niben101Scf00902g03004.1 19 KCGRWNPTTEQVKVLTELFRS 39 568****************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 112 aa Download sequence Send to blast |
MSGFSVRARG GCGGGGGTKC GRWNPTTEQV KVLTELFRSG LHFSEIHNYN QGSEHPERVK 60 ETLQLFPLNS LSESESEKLR YFAEECKENA AFSYNIGTEM DHPTLDLRLS FL |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016445580.1 | 3e-42 | PREDICTED: WUSCHEL-related homeobox 5-like | ||||
TrEMBL | A0A1S3Y0H7 | 8e-41 | A0A1S3Y0H7_TOBAC; WUSCHEL-related homeobox 5-like | ||||
STRING | XP_009613150.1 | 2e-41 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12201 | 19 | 22 |