PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf00646g06011.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 212aa    MW: 22673.6 Da    PI: 8.2064
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf00646g06011.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1475.6e-15144195454
                               XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHH CS
                    bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkk 54 
                                +++rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L ke +e+ k+
  Niben101Scf00646g06011.1 144 QQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEENAKLLKEeAEKNKE 195
                               689************************************9875540333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-10141205IPR004827Basic-leucine zipper domain
PfamPF001701.5E-13143195IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978143195IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-10145195No hitNo description
CDDcd147075.23E-20145191No hitNo description
Gene3DG3DSA:1.20.5.1707.6E-14146200No hitNo description
PROSITE patternPS000360148163IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MAVMWDPVRL WMRCGGKLYQ GVGLEVWREI VSGGSGGGGG GGGSGREPEM TLEDFLTKAG  60
AVTEEDVRVP AISPPPATAA PAAGGFVVDN MGNCQFPMGM QNGPHMGFGN GFVAIAGSGS  120
GSGGSGRGKR RSTVEELPLD KATQQKQRRM IKNRESAARS RERKQAYTVE LESLVTQLEE  180
ENAKLLKEEA EKNKERLKQV ADSGNVKQFM ND
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13143SGGSGGGGGGGGS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009615514.12e-86PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
TrEMBLA0A1J6JZ211e-79A0A1J6JZ21_NICAT; G-box-binding factor 4
STRINGXP_009615514.17e-86(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27712452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.13e-17bZIP family protein