PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf00592g06001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 235aa MW: 25930 Da PI: 10.1077 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.4 | 1.5e-08 | 154 | 179 | 3 | 28 |
XXCHHHCHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaei 28 ++++ +r++kNRe+A rsR+RK++++ Niben101Scf00592g06001.1 154 SDQKNKRMIKNRESAARSRARKQESC 179 7899*******************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-11 | 148 | 213 | No hit | No description |
SMART | SM00338 | 1.1E-5 | 152 | 230 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-6 | 155 | 179 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 6.76E-23 | 156 | 220 | No hit | No description |
SuperFamily | SSF57959 | 3.56E-5 | 157 | 213 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 159 | 174 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence Send to blast |
MSSSTSSSLT PTSNNYRLNN KTMEEVWKDI NLSSLNDHTT TSGDHIDPQQ NTSNSTNFGG 60 MILQDFLASP FANNPKTAAK GYVSPIILPP PPAAVTVLTL NSGPGLHFFG NLRQNSTSQQ 120 EKSISNRSFE ALASPVGGNT NGRKRCSESD NNSSDQKNKR MIKNRESAAR SRARKQESCF 180 PVYNLQAYTN ELELKVAHLM EENVRLKKQQ QQLCLATAAQ LPKKMSLYRT STAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019241158.1 | 1e-133 | PREDICTED: bZIP transcription factor 27-like | ||||
Swissprot | Q84JK2 | 3e-43 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A1J6KCL8 | 1e-131 | A0A1J6KCL8_NICAT; Bzip transcription factor 27 | ||||
STRING | XP_009599728.1 | 1e-124 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3572 | 22 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 3e-39 | bZIP family protein |