 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Niben101Scf00495g02007.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
TCP |
Protein Properties |
Length: 242aa MW: 26841.7 Da PI: 7.2189 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf00495g02007.1 | genome | BTI | - |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 30.8 | 9.8e-10 | 43 | 91 | 23 | 73 |
TCP 23 RlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73
R +++ a++ + d+LG+ ++sk i+WLl + k++i+el+ ++ +++s +
Niben101Scf00495g02007.1 43 RTPSSSARQTWA--DRLGLSQPSKVIDWLLDATKHEIDELPPLQMPPPSLS 91
778888999877..*****************************88887333 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MLIISNAKTK LIMNPSRNNS QANKQEAAGH DHDHDTNKSK ISRTPSSSAR QTWADRLGLS 60 QPSKVIDWLL DATKHEIDEL PPLQMPPPSL SHFFTNTYMR DGPNQELLSL KESNHFDVTT 120 AFGKDKWIAS NDQENQDGTN VGGYVPLFSS QNISSLPAGS HHLYFCPTAK TFSSLVPAPF 180 MSTTNSQLNH FHFLSSSTNS QHVPPNQLAP TLQLISTPVK TTKTNDHTKG INSQDKDDHD 240 NK
|
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT5G60970.1 | 4e-07 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 |