 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Niben101Scf00445g02005.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
NAC |
Protein Properties |
Length: 256aa MW: 29460.3 Da PI: 9.733 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf00445g02005.1 | genome | BTI | - |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 161.1 | 4.3e-50 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
lppGfrF+Ptdeelvv+yLk+kv + +l++ ++i ev+iyk++PwdLp +e+e yfFs+r+ ky++g+r+nrat+sgyWka
Niben101Scf00445g02005.1 14 LPPGFRFRPTDEELVVQYLKRKVLSFPLPA-SIILEVEIYKSDPWDLPG---YSEEERYFFSTREVKYPNGNRSNRATNSGYWKA 94
79****************************.89***************3...367899*************************** PP
NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
tg dk+++s +++lvglkktLvfy+g++p+g +t+W+mheyrl
Niben101Scf00445g02005.1 95 TGIDKQIVSCkSQQLVGLKKTLVFYRGKSPHGCRTNWIMHEYRL 138
*******99746677***************************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MEKLSFVKNG VLRLPPGFRF RPTDEELVVQ YLKRKVLSFP LPASIILEVE IYKSDPWDLP 60 GYSEEERYFF STREVKYPNG NRSNRATNSG YWKATGIDKQ IVSCKSQQLV GLKKTLVFYR 120 GKSPHGCRTN WIMHEYRLPN LQPSSIQPNN NLLQENLVLC RIFLKRRDGK NEEDITHQVF 180 ISRNETANSG NKKKKAVFYD FMAREREELN GVIPASTSFS GSSGITELTA NESDDHEESS 240 SSFTSFTTAF RRKQLP
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-52 | 12 | 166 | 15 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-52 | 12 | 166 | 15 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-52 | 12 | 166 | 15 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-52 | 12 | 166 | 15 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-52 | 12 | 166 | 18 | 169 | NAC domain-containing protein 19 |
3swm_B | 1e-52 | 12 | 166 | 18 | 169 | NAC domain-containing protein 19 |
3swm_C | 1e-52 | 12 | 166 | 18 | 169 | NAC domain-containing protein 19 |
3swm_D | 1e-52 | 12 | 166 | 18 | 169 | NAC domain-containing protein 19 |
3swp_A | 1e-52 | 12 | 166 | 18 | 169 | NAC domain-containing protein 19 |
3swp_B | 1e-52 | 12 | 166 | 18 | 169 | NAC domain-containing protein 19 |
3swp_C | 1e-52 | 12 | 166 | 18 | 169 | NAC domain-containing protein 19 |
3swp_D | 1e-52 | 12 | 166 | 18 | 169 | NAC domain-containing protein 19 |
4dul_A | 1e-52 | 12 | 166 | 15 | 166 | NAC domain-containing protein 19 |
4dul_B | 1e-52 | 12 | 166 | 15 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |