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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Niben101Scf00436g06007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
C2H2 |
Protein Properties |
Length: 346aa MW: 37469.4 Da PI: 7.8653 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf00436g06007.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 11.7 | 0.00082 | 130 | 152 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C+++F++ L H +H
Niben101Scf00436g06007.1 130 YECKTCNRTFPSFQALGGHRASH 152
99**********99999998887 PP
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2 | zf-C2H2 | 13.4 | 0.00023 | 240 | 262 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++Cg Fs+ L H+r+H
Niben101Scf00436g06007.1 240 HECSICGSEFSSGQALGGHMRKH 262
78********************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 346 aa
Download sequence Send
to blast |
METSQDFPER SYAFKGKRSK RSRPSSPLNI AGTMVTSSSS AVGGSDDGGG GDVYYSSAII 60 QYSPTTSTTQ ISTSCTSEED EDMANCLILL AQSGRRKVQV VTEVKKEKIS SRKFTEMVNT 120 TTGKAGFFVY ECKTCNRTFP SFQALGGHRA SHKRPKTIVE EKKSVTITAT ATATASASTA 180 MATASAGAHS LVENHDDHHG KNDQEEGRLN KLNASLSIQI VNNNKGINFH SNSNSKPKIH 240 ECSICGSEFS SGQALGGHMR KHKPPTTTTA TNSTKVSTNI HIETISNISE SSHDDVGANY 300 KEEEKSTRNF LSLDLNLPAP PEDDRRETKF EQSLVFSAAP LVDCHY
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