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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf00301g03001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 501aa MW: 56176 Da PI: 6.5126 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.6 | 8.6e-11 | 210 | 249 | 5 | 41 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k rr+++NReAAr+sR+RKka++++Le + ++Le+e Niben101Scf00301g03001.1 210 KTLRRLAQNREAARKSRLRKKAYVQQLESsriRLAQLEQE 249 7789***********************9633356666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.6E-8 | 201 | 254 | No hit | No description |
SMART | SM00338 | 4.8E-7 | 206 | 278 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.933 | 208 | 252 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 1.09E-21 | 210 | 262 | No hit | No description |
Pfam | PF00170 | 6.0E-8 | 210 | 249 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.87E-7 | 210 | 247 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 213 | 228 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 5.1E-30 | 301 | 375 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 501 aa Download sequence Send to blast |
MGSYSTEEED KLFIGVGVGV HFMASSNKNN DDLLLNNNSQ ISFGSQQQFF HSSQQQHDQH 60 QLLNNSNQIS FGLLQQQSSS SSNPGNFINK DNSGAYDLGE LDQALFLYLD GQEPSSIQDQ 120 RQNSGLRPPT LNIFPSQPMH IEPSSTKVNN GLVSQETSGS KKSSQPSIAK TDVVPSASGP 180 EPPKTAKREG IRKGPTSSSE QDAPKTPDPK TLRRLAQNRE AARKSRLRKK AYVQQLESSR 240 IRLAQLEQEI QRARSQGFYV GGNALQAGEQ GLAVNMANIS SDAAIFDLEY ARWLEEHHRL 300 MCELRDAVQE HLQENELRIY VENCITHYDE IMNLKCMLAK SDVFHLVSGL WKTPAERCFL 360 WMGDFRPSEL LKIILSQIEP LTENQLMGIC GLQQSTQEAE DALSQGLESL NQSLSDTIAS 420 DTLACLQNMA NYMGQMALAM NKLSTVEAFL RQADNLRHQT IHRLHQILTT RQAARCFLAI 480 GEYFHRLRAL SSLWLARPRQ E |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00491 | DAP | Transfer from AT5G06839 | Download |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009798380.1 | 0.0 | PREDICTED: transcription factor HBP-1b(c38)-like | ||||
Refseq | XP_016463456.1 | 0.0 | PREDICTED: transcription factor HBP-1b(c38)-like | ||||
Swissprot | Q52MZ2 | 0.0 | TGA10_TOBAC; bZIP transcription factor TGA10 | ||||
TrEMBL | A0A1S3ZGP2 | 0.0 | A0A1S3ZGP2_TOBAC; transcription factor HBP-1b(C38)-like | ||||
TrEMBL | A0A1U7YHS6 | 0.0 | A0A1U7YHS6_NICSY; transcription factor HBP-1b(C38)-like | ||||
STRING | XP_009798380.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2279 | 21 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-180 | bZIP family protein |