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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Niben101Scf00272g08005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
NAC |
Protein Properties |
Length: 364aa MW: 41533.7 Da PI: 8.6702 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf00272g08005.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 157.6 | 5.1e-49 | 2 | 129 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
+ pGfrFhP deelv +yL++k+++k l++ e ik++diyk++PwdLpk ++ +e+e yfF++rd+ky++ +r+nr+t +g+W+a
Niben101Scf00272g08005.1 2 MLPGFRFHPIDEELVGFYLRRKIQHKCLSI-ELIKQLDIYKFDPWDLPKLATIGEREQYFFCPRDRKYRNRTRPNRVTGAGFWNA 85
579**************************9.89***************8778899****************************** PP
NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
tg+d++++s+ +++ +glkk+Lvfykgra kg+ktdW+mhe+ l
Niben101Scf00272g08005.1 86 TGTDRPIYSSeGSKCIGLKKSLVFYKGRAAKGTKTDWMMHEFLL 129
*********956677**************************976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MMLPGFRFHP IDEELVGFYL RRKIQHKCLS IELIKQLDIY KFDPWDLPKL ATIGEREQYF 60 FCPRDRKYRN RTRPNRVTGA GFWNATGTDR PIYSSEGSKC IGLKKSLVFY KGRAAKGTKT 120 DWMMHEFLLP SITDSTTSKR FLDKNMRPND SWAICRIFKK ANSNAHRALS HSWVSPQISS 180 NTTPYFQTSD HFTPNEMSFI AKSTSSAIQF SNDLQNSSMA SFSPIDIPSY RTINPMTTSN 240 RHPQQISIST HESTTSNTLS NSYTNLNIDA SSLLLNMSSS ILGDYNNFTI TLPDNIEENQ 300 IQEAGNLVKE LPNVNVDHMQ EQWGNVRSVI GFPVNTDIDA WNKSRLLWDS SPCPTEMSSS 360 YSTN
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-52 | 4 | 163 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-52 | 4 | 163 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-52 | 4 | 163 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-52 | 4 | 163 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-52 | 4 | 163 | 22 | 171 | NAC domain-containing protein 19 |
3swm_B | 4e-52 | 4 | 163 | 22 | 171 | NAC domain-containing protein 19 |
3swm_C | 4e-52 | 4 | 163 | 22 | 171 | NAC domain-containing protein 19 |
3swm_D | 4e-52 | 4 | 163 | 22 | 171 | NAC domain-containing protein 19 |
3swp_A | 4e-52 | 4 | 163 | 22 | 171 | NAC domain-containing protein 19 |
3swp_B | 4e-52 | 4 | 163 | 22 | 171 | NAC domain-containing protein 19 |
3swp_C | 4e-52 | 4 | 163 | 22 | 171 | NAC domain-containing protein 19 |
3swp_D | 4e-52 | 4 | 163 | 22 | 171 | NAC domain-containing protein 19 |
4dul_A | 3e-52 | 4 | 163 | 19 | 168 | NAC domain-containing protein 19 |
4dul_B | 3e-52 | 4 | 163 | 19 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane. {ECO:0000269|PubMed:19081078}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by SMB in oriented-divised root cap stem cells. {ECO:0000269|PubMed:19081078}. |