PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf00107g00007.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 411aa    MW: 45238 Da    PI: 9.9665
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf00107g00007.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.28.5e-14333382554
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                               +r +r++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+  e  +
  Niben101Scf00107g00007.1 333 RRRKRMIKNRESAARSRARKQAYTLELEAEVEKLKEINEDLQKKQAEFIE 382
                               689**************************************998666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-12329390IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.53331376IPR004827Basic-leucine zipper domain
CDDcd147075.39E-23333387No hitNo description
PfamPF001706.1E-12333385IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.64E-10333380No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-13333381No hitNo description
PROSITE patternPS000360336351IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MGSYMNFKNF SDTPQTESNG GMLMGSGNFP LARQSSVYSL TFDELHSTCG LGKDLGSMNL  60
EDLLKNIWTA EESNVVASAA GVGNANTAGG YLQRQGSFTL PRTLSQKTVD ELWREFQKET  120
AVSAKDRSGT EWPNLGQRQS TLGEMTLEEF LVRAGVVRED MQPTGSSNNV RFTGGLSQPS  180
TNNNGLNIAF QQPTQNPGLF SNQFEEKNML NVVSATSSQQ KPNVAFASPM QLGTNVQLAN  240
TGAREPAVSM SSPSVNTSTI VQGSVMQGGV RGLTGLRNGV TPAKRGSPGN QLSPDMMSKK  300
ELDRSSLSPS PYAFIEGGKG RRPCNSLEKV VERRRKRMIK NRESAARSRA RKQAYTLELE  360
AEVEKLKEIN EDLQKKQAEF IEMQKDQLME KMNMPWVNKL RCLRRTLTGP W
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009760513.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6
RefseqXP_016441338.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X2
TrEMBLA0A1S3XN380.0A0A1S3XN38_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X2
TrEMBLA0A1U7V2A80.0A0A1U7V2A8_NICSY; ABSCISIC ACID-INSENSITIVE 5-like protein 6
STRINGXP_009760513.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.23e-77abscisic acid responsive elements-binding factor 3